CDS
Accession Number | TCMCG022C23294 |
gbkey | CDS |
Protein Id | XP_018719642.2 |
Location | join(3228908..3229207,3229794..3229919,3230002..3230041,3230121..3230203,3231105..3231182,3231279..3231332,3231491..3231625,3231760..3233376) |
Gene | LOC104422303 |
GeneID | 104422303 |
Organism | Eucalyptus grandis |
Protein
Length | 810aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA698663 |
db_source | XM_018864097.2 |
Definition | splicing factor 1 isoform X1 [Eucalyptus grandis] |
EGGNOG-MAPPER Annotation
COG_category | A |
Description | K homology RNA-binding domain |
KEGG_TC | - |
KEGG_Module | - |
KEGG_Reaction | - |
KEGG_rclass | - |
BRITE |
ko00000
[VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
KEGG_ko |
ko:K13095
[VIEW IN KEGG] |
EC | - |
KEGG_Pathway | - |
GOs | - |
Sequence
CDS: ATGAACACGAAGGTTGACCAATCATCTGATGTTGAACCTGCTGGATTAAAGATGGCAGGGGCGTCAGCAGCATCAACATCTAGCTCAAAGGTCTCCATGTTTGGCAAGAAATCTGGTTTTGTCATACCAAAGAACAAGTTATCAGGTTCATTGGTTCCCATCTTTCGAGGAAATAAGAAGCTAGGTGGCGGTGATACAACTAGTGAGGAAAGTGGCAAACAGGGGCAAAGGAAAACAAAATGGGGACCTGACTTGACCCAAGATGCTGCAGTCAGGAGAGCAAGATCTTTGGCTTATCAGACTCGGGTGGACCAAATTACAAAACAACTAGGATCGGGAATTTTGGAGATTGATGAGAATGTGGAGTCACTGTCAGCAGCTGAACAGTCTGGTGAAAGATCTTCTGATAATGTCCTTGACAGAGAGTCGACAAAATTGTTGGCGCTTGAAAAGCGGGAAGCTATAGGCGAAATCCTCAAGTTGAATGCAAATTTCAAGGCACCACCTGATTATAAACCCCTGTTGAAAGAGGACAGAGTGCTCATTCCTGTAAAGGAATATCCTGGATACAATTTCATTGGCTTGATCTTCGGGCCTGGAGGTGATAATAGAAAGAGACTAGAAAAGGAAACTGGAGCTAAGATACAGGTGTATGCTGTCAAGTCTGGGACCAGGGATAAGGGCGAAATAATTTCTGCTGATGGAAACGATTTCCAGGGTTCCTTTGAAGAAATAAATGTCCATGTATCTGCTGATACATTTGAGAAAGTTGATGCAGCAGTGTCCGTCATTGAATTGCTAGTAACATCTGTATCTGGTAATCTTGCTCCTGCTTCTACAACATCTGCTTCGAGTCCGGCTGAGAGCAAGAATGTCCCCAGTTATGCAAACTCATCTTCTATGGACACTGTTCCAGTGTCAAGTCAGGGACACATTGAAGATTTTATGGGTCCCTCACAGACTTCTCAACAGGTTCAGTTTCAATATTCAAATCCATGGTTTGGCAACACTCCCCACAATGCTCCAGCAAATCAATTTCCCGGTTTCATTCCATCACCAAATACTTCAGCACCAATTCTGAATAGTCCTGGCCATCCAATGCCTTCTCTGTTTGGTGCTCGACCAGCTTCTGTAGCTGGATTTAACTCCTTATCTCAGAATCCTTCTCTGCTCCCGCCAAGACAAAATCCGTCCTCTCAATATATGCAAAATTCAGTAATGATGCATCCTTCTGGTATTGGCCTTCCACCAAGAAACTTTCATTCATTTCCGCAGGCCTCGTCACCAGCTCCACCAGTTCATTCAGCTCCTATTCCTTTTTCTGTGAGCCAATCCTTGCAAACCAGACCACCACCAATACCCTCATTTCCTCAGCTCAAAGCAAATGCTACAGCCGGACCACAATCAGATTGGCCCATACTACCAGCTGGGGGCCCTAGCAATATGATGCAGGTGGGTCCACCCCCAGCGCCATCCATCAACCTACAACCAAACATTGCTTCTTCGGCACCAATTACAAATGCTTCAGCAGGGAGCACAAGCATGATCACAGGTCCTACCTACCCATCTGGTCAATCAACTCCACATTCGATGGCTATGTCAGGGAGTCGTCCGGCTGGTGTCCCTATGTTATCTTCTATGCCACCACCAATGCCAATTCAATCTGCAAACAACACACAAGGGGCACTTCCCCCTCGTGTGACAATGAACCCTTTTCCAGGATCTTTGTCATCTGGGTCACCTGCCCTGTCTTTCCAGTCGGGCCCCAGTACTTTCACTGGAAATATACCCAATTTTACCCCCATTAGATCACCAGCTAATGCTGCTCCGAGTCCACATCGTCCAAATTTTGGGGATTTTACTTTCCAGCCTCAGCAGCAGCAAGCCTCACAGACCTTTTCTGGGCCAGGCATCCAAACTCCTGTGCCTCAACCGAATTCTTTCCGCCCAGCAATACATGATCCTCAATCTATCACGCCTGTCCTCCTAAGGCCATCAATGGGAACGCAGACAGCTCGACCTCAAGGTGGCCCGTCCCCGATTCCCTTTCCAGGAGACTCATCGAGATTTCCCTCATTTCCAGTGGTGGGTCCCACACCAGTACCCCAGATGCGGCCAAGGAACATGAATCCAGCGGCGCAACTACCTGACCTTGCTGGCAGTTTTCCCTCCAGGCCTGGCAATCCAATTGAAGTCCAGAGGGCCTTCCATGGTCAGATGAATCAACCGCCGAGACACCACTTCATACACGGTCCATCTGCCTTTCCTGGCAGACCGGCCCTAGGCCCTGGTGGGAGGCAAATTTACGATCCGTTTTCACCGACCTCGACTGCTAATGCACCTCAGCAGCACGGAGTGAATCCAGCAATTGTAAAGAGACAGGAGAATGATCCCGAGTATGAGGACTTGATGGCCTCTGTTGGAGTGAAATGA |
Protein: MNTKVDQSSDVEPAGLKMAGASAASTSSSKVSMFGKKSGFVIPKNKLSGSLVPIFRGNKKLGGGDTTSEESGKQGQRKTKWGPDLTQDAAVRRARSLAYQTRVDQITKQLGSGILEIDENVESLSAAEQSGERSSDNVLDRESTKLLALEKREAIGEILKLNANFKAPPDYKPLLKEDRVLIPVKEYPGYNFIGLIFGPGGDNRKRLEKETGAKIQVYAVKSGTRDKGEIISADGNDFQGSFEEINVHVSADTFEKVDAAVSVIELLVTSVSGNLAPASTTSASSPAESKNVPSYANSSSMDTVPVSSQGHIEDFMGPSQTSQQVQFQYSNPWFGNTPHNAPANQFPGFIPSPNTSAPILNSPGHPMPSLFGARPASVAGFNSLSQNPSLLPPRQNPSSQYMQNSVMMHPSGIGLPPRNFHSFPQASSPAPPVHSAPIPFSVSQSLQTRPPPIPSFPQLKANATAGPQSDWPILPAGGPSNMMQVGPPPAPSINLQPNIASSAPITNASAGSTSMITGPTYPSGQSTPHSMAMSGSRPAGVPMLSSMPPPMPIQSANNTQGALPPRVTMNPFPGSLSSGSPALSFQSGPSTFTGNIPNFTPIRSPANAAPSPHRPNFGDFTFQPQQQQASQTFSGPGIQTPVPQPNSFRPAIHDPQSITPVLLRPSMGTQTARPQGGPSPIPFPGDSSRFPSFPVVGPTPVPQMRPRNMNPAAQLPDLAGSFPSRPGNPIEVQRAFHGQMNQPPRHHFIHGPSAFPGRPALGPGGRQIYDPFSPTSTANAPQQHGVNPAIVKRQENDPEYEDLMASVGVK |